Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
I3JFU1_ORENISRY-box transcription factor 32. (322 aa)    
Predicted Functional Partners:
sox17
SRY-box transcription factor 17.
  
 
0.944
tcf7
Transcription factor 7.
    
  0.915
lef1
Lymphoid enhancer-binding factor 1.
    
  0.915
tcf7l2
Transcription factor 7 like 2.
    
  0.915
LOC100711530
SRY-box transcription factor 18.
  
 
0.881
mixl1
Mix paired-like homeobox.
   
 0.772
gata5
GATA binding protein 5.
    
 0.763
LOC100689834
Fibronectin 1a.
    
 
 0.666
sox7
SRY-box transcription factor 7.
   
 
 0.661
LOC102079063
Teratocarcinoma-derived growth factor 1.
    
 0.631
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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