STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100698816Uncharacterized protein. (273 aa)    
Predicted Functional Partners:
ENSONIP00000045796
annotation not available
 
  
   0.907
cdc73
Ro60, Y RNA binding protein.
   
 0.691
paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.642
I3K8L4_ORENI
Cyclin-dependent kinase 2 interacting protein.
    
 0.626
ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.626
pot1
Protection of telomeres 1 homolog.
    
 
 0.624
rtf1
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.532
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 
 0.529
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 
 0.529
LOC100694808
Aurora kinase A; Belongs to the protein kinase superfamily.
    
 
 0.479
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (28%) [HD]