Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC109194174Layilin b. (366 aa)    
Predicted Functional Partners:
LOC100691741
C-type lectin domain family 3, member Bb.
      
 0.769
LOC100711768
C-type lectin domain family 3, member Ba.
      
 0.768
atrn
Attractin.
      
 0.749
COLEC10
Collectin subfamily member 10.
      
 0.575
I3KYM9_ORENI
Uncharacterized protein.
    
 0.569
I3IVA2_ORENI
Stabilin 1.
      
 0.553
SELE
Selectin E.
      
 0.458
SELE-2
Selectin E.
      
 0.458
SELE-3
Uncharacterized protein.
      
 0.458
I3JV43_ORENI
Uncharacterized protein.
      
 0.436
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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