Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
slc25a40Solute carrier family 25 member 40; Belongs to the mitochondrial carrier (TC 2.A.29) family. (344 aa)    
Predicted Functional Partners:
Rundc3b
RUN domain containing 3b.
      
 0.918
acbd7
Carnitine O-octanoyltransferase.
      
 0.668
pum1
Pumilio RNA-binding family member 1.
   
   0.599
I3JUG4_ORENI
Cyclin D binding myb-like transcription factor 1.
      
 0.547
isca1
Iron-sulfur cluster assembly 1 homolog, mitochondrial.
   
  
 0.527
cnot4
CCR4-NOT transcription complex, subunit 4a.
      
 0.526
LOC100534453
ATP-binding cassette, sub-family B (MDR/TAP), member 4.
      
 0.492
LOC100708584
RNA binding motif protein 4.1.
      
 0.490
cmc1
COX assembly mitochondrial protein homolog.
      
 0.474
srrm1
Serine/arginine repetitive matrix 1.
      
 0.462
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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