STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hoxb9Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (283 aa)    
Predicted Functional Partners:
Hoxb5
Homeobox B5b.
   
 
0.658
LOC100702637
Homeobox B6b.
   
 
0.656
LOC100697602
Homeobox domain-containing protein.
   
 
0.656
I3JG03_ORENI
Homeobox domain-containing protein.
   
 
0.603
LOC100534461
Homeobox B3a.
   
 
0.524
hoxc8
Homeobox C8a.
   
 
0.516
hoxb8
Homeobox B8a.
   
 
0.510
hand2
Heart and neural crest derivatives expressed 2.
    
 
 0.458
gcm2
Glial cells missing transcription factor 2.
      
 0.447
tbx4
T-box transcription factor 4.
    
 
 0.444
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.