Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100534461Homeobox B3a. (486 aa)    
Predicted Functional Partners:
sdha
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
    
   0.916
LOC100698401
Homeobox B4a.
   
  
0.871
hoxd3
Homeobox D3a.
   
  
 0.736
I3JG03_ORENI
Homeobox domain-containing protein.
   
  
 0.631
Hoxb5
Homeobox B5b.
   
  
 0.631
LOC100702637
Homeobox B6b.
   
  
 0.598
LOC100697602
Homeobox domain-containing protein.
   
  
 0.598
snai2
Snail family zinc finger 2.
      
 0.577
pxylp1
2-phosphoxylose phosphatase 1; Belongs to the histidine acid phosphatase family.
      
 0.577
egr2
Early growth response 2b.
    
 0.503
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (10%) [HD]