Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
coilCoilin p80. (569 aa)    
Predicted Functional Partners:
LOC100698882
Survival of motor neuron 1, telomeric.
    
 0.961
psme3
Proteasome activator subunit 3.
    
 
 0.945
snrpb
Small nuclear ribonucleoprotein-associated protein.
    
 
 0.944
Sart3
Spliceosome associated factor 3, U4/U6 recycling protein.
   
 
 0.921
wrap53
Telomerase Cajal body protein 1 isoform X1.
    
 
 0.887
LOC102080291
Survival motor neuron protein isoform X1.
    
 0.851
polr2l
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
    
 0.751
ENSONIP00000079948
Uncharacterized protein LOC109194435 isoform X1.
    
 0.746
tgs1
LYN proto-oncogene, Src family tyrosine kinase.
   
 0.718
lsm2
U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 
 0.714
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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