STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100702377Thioesterase superfamily member 4. (249 aa)    
Predicted Functional Partners:
acot9
Acyl-CoA thioesterase 9, tandem duplicate 2.
     
 0.676
LOC100699909
Trans-2,3-enoyl-CoA reductase a.
     
  0.650
LOC100710535
Trans-2,3-enoyl-CoA reductase-like 2a.
     
  0.650
ENSONIP00000000047
RAC-gamma serine/threonine-protein kinase.
    
 0.636
LOC100707971
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.636
LOC100702193
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.636
akt1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.636
LOC100691860
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.636
pdpk1
3-phosphoinositide dependent protein kinase 1b.
     
 0.582
ACOT11
Acyl-CoA thioesterase 11a.
     
 0.567
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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