Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100701202Uncharacterized protein. (441 aa)    
Predicted Functional Partners:
Slc39a13
Solute carrier family 39 member 13.
      
 0.923
mrps14
Mitochondrial ribosomal protein S14.
      
 0.923
ddx52
DEAD (Asp-Glu-Ala-Asp) box polypeptide 52.
      
 0.922
bms1
BMS1 ribosome biogenesis factor.
      
 0.902
LOC100695096
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
      
 0.780
zbtb44
Zinc finger and BTB domain containing 44.
    
 
 0.770
zswim8
Zinc finger, SWIM-type containing 8.
      
 0.700
LOC100534522
Prolactin.
      
 0.692
LOC100697904
Prolactin 2.
      
 0.692
LOC100691741
C-type lectin domain family 3, member Bb.
   
 
 0.642
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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