STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100702647Si:dkey-71b5.7. (694 aa)    
Predicted Functional Partners:
Tecta
Tectorin alpha.
    
 0.616
clrn2
Clarin 2.
      
 0.596
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
      
 0.587
I3IYH1_ORENI
Thrombospondin-type laminin G domain and EAR repeats a.
    
 0.583
Tspear
Uncharacterized protein.
    
 0.583
LOC100692367
Parvalbumin 8; Belongs to the parvalbumin family.
   
 0.557
Adgrv1
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.552
I3J143_ORENI
Espin.
   
 0.530
LOC100690913
Espin like a.
   
 0.530
smpx
Small muscle protein X-linked.
      
 0.482
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.