STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
timm29Translocase of inner mitochondrial membrane 29. (234 aa)    
Predicted Functional Partners:
TIMM22
Translocase of inner mitochondrial membrane 22.
   
 0.941
timm10b
Translocase of inner mitochondrial membrane 10 homolog B (yeast).
   
 
 0.927
agk
Acylglycerol kinase.
    
 
 0.910
timm10
Translocase of inner mitochondrial membrane 10 homolog (yeast).
   
 
 0.908
ENSONIP00000044364
annotation not available
   
 
 0.842
ENSONIP00000068547
annotation not available
   
 
 0.842
cactin
Cactin.
   
 
 0.662
fmc1
Protein FMC1 homolog.
   
  
 0.502
LOC100700087
Signal-regulatory protein beta-2.
   
 
 0.496
LOC100702256
Uncharacterized protein.
   
 
 0.496
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.