STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
blvraBiliverdin reductase A. (289 aa)    
Predicted Functional Partners:
blvrb
Biliverdin reductase B.
   
 
 0.978
LOC100700287
Heme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase.
     
 0.943
LOC100710567
Heme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase.
     
 0.943
LOC100705244
Heme oxygenase 2b.
     
 0.938
LOC100700023
Heme oxygenase 2a.
     
 0.938
tgds
NAD(P)-bd_dom domain-containing protein.
  
 
 0.676
ENSONIP00000038678
Transmembrane protein 254.
   
 
 0.668
LOC109204782
Transmembrane protein 254.
   
 
 0.668
LOC100696407
Uncharacterized protein.
   
 
 0.668
rgn
Regucalcin.
  
 
 0.667
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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