STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100705513Uncharacterized protein. (618 aa)    
Predicted Functional Partners:
LOC100690921
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.503
LOC100703627
Cholinergic receptor, nicotinic, alpha 4b.
  
0.499
LOC100691407
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
  
0.498
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
   
0.481
LOC100691234
Cholinergic receptor, nicotinic, alpha 1 (muscle).
   
0.481
LOC100699752
Cholinergic receptor, nicotinic, beta polypeptide 3a.
  
0.473
Chrna5
Cholinergic receptor, nicotinic, alpha 5.
  
0.464
LOC100697749
Uncharacterized protein.
  
0.462
LOC100708615
Cholinergic receptor, nicotinic, beta 3b (neuronal).
   
0.450
LOC100693455
Cholinergic receptor, nicotinic, alpha 9.
   
0.446
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.