Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC100693612Cytochrome b561. (252 aa)    
Predicted Functional Partners:
pam
Peptidylglycine alpha-amidating monooxygenase.
      
 0.679
LOC100695601
Cytochrome b561 family, member D2.
      
 0.639
ciao2a
Cytosolic iron-sulfur assembly component 2A.
      
 0.625
nus1
NUS1 dehydrodolichyl diphosphate synthase subunit.
      
 0.621
LOC102080704
Uncharacterized protein.
      
 0.608
I3JPK2_ORENI
Uncharacterized protein.
      
 0.608
LOC100697937
Uncharacterized protein.
      
 0.608
TANC2
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2.
      
 0.594
CDYL2
Chromodomain Y like 2.
    
   0.581
cdyl
Chromodomain protein, Y-like.
    
   0.581
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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