Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bphlBiphenyl hydrolase like. (278 aa)    
Predicted Functional Partners:
ppp4r4
Protein phosphatase 4, regulatory subunit 4.
    
 0.710
blmh
Bleomycin hydrolase; Belongs to the peptidase C1 family.
      
 0.700
LOC100702365
Uncharacterized protein.
      
 0.643
LOC100711605
Malate synthase-like.
    
 0.640
naaladl1
Si:ch211-214j8.1.
      
 0.630
mrpl10
Mitochondrial ribosomal protein L10.
      
 0.629
ubfd1
Ubiquitin family domain containing 1.
      
 0.628
tmem205
Transmembrane protein 205.
   
  
 0.563
mbd5
Methyl-CpG binding domain protein 5.
   
  
 0.558
aven
Apoptosis, caspase activation inhibitor.
      
 0.550
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.