STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100699987Uncharacterized protein. (585 aa)    
Predicted Functional Partners:
selenos
Selenoprotein S.
      
 0.559
selenok
Selenoprotein K.
      
 0.541
ENSONIP00000071945
Selenoprotein T, 1a.
      
 0.529
I3K6K9_ORENI
Selenoprotein M.
      
 0.505
cfi
Uncharacterized protein; Belongs to the peptidase S1 family.
   
    0.499
sh3bgrl
SH3 domain-binding glutamic acid-rich-like protein; Belongs to the SH3BGR family.
   
    0.499
txnrd2
Thioredoxin reductase 2, tandem duplicate 1.
   
  
 0.482
ENSONIP00000070461
Selenoprotein F.
      
 0.481
eefsec
Eukaryotic elongation factor, selenocysteine-tRNA-specific.
   
  
 0.476
Selenon
Selenoprotein N.
      
 0.474
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.