Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
apbb1ipAmyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein. (666 aa)    
Predicted Functional Partners:
rap1b
Uncharacterized protein.
    
 0.873
LOC100690250
Ras-related protein Rap-1A.
    
 0.873
LOC100692376
Ras-related protein Rap-1A.
    
 0.797
Tlnrd1
Talin rod domain containing 1.
    
 0.787
LOC100711808
Talin 1.
    
 0.787
I3J2M2_ORENI
Talin 2a.
    
 0.787
tln2
Talin 2b.
    
 0.787
LOC100696514
Enah/Vasp-like b.
    
 0.749
vasp
Vasodilator stimulated phosphoprotein b.
    
 0.749
LOC100692448
WH1 domain-containing protein.
    
 0.749
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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