Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
THNSL1Threonine synthase like 1. (725 aa)    
Predicted Functional Partners:
psph
Phosphoserine phosphatase.
  
 0.818
psat1
Phosphoserine aminotransferase.
   
 0.806
I3JKS7_ORENI
PALP domain-containing protein.
  
 
 0.766
LOC100705145
Si:ch73-263o4.3.
  
 
 0.766
LOC100693061
Threonine aldolase 1.
   
 0.756
oat
Ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.728
SDS
Serine dehydratase.
  
 
 0.724
LOC100705758
Serine dehydratase-like.
  
 
 0.724
hddc3
HD domain containing 3.
    
 0.699
ugcg
UDP-glucose ceramide glucosyltransferase.
  
 
 0.686
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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