STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
setdb1SET domain bifurcated histone lysine methyltransferase 1b. (1230 aa)    
Predicted Functional Partners:
I3KNJ8_ORENI
Activating transcription factor 7 interacting protein.
   
 0.900
atf7ip2
Activating transcription factor 7-interacting protein 2 isoform X1.
   
 0.900
arl14ep
ADP-ribosylation factor-like 14 effector protein.
    
 
 0.857
phox2b
Paired like homeobox 2Bb.
      
 0.700
camkmt
Calmodulin-lysine N-methyltransferase.
     
 0.695
ENSONIP00000017541
Uncharacterized protein LOC112844609.
   
 0.688
ENSONIP00000027150
annotation not available
   
 0.688
ENSONIP00000027429
annotation not available
   
 0.688
ENSONIP00000037156
Uncharacterized protein LOC112848329.
   
 0.688
ENSONIP00000037239
annotation not available
   
 0.688
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.