STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mbtps2Membrane-bound transcription factor peptidase, site 2. (502 aa)    
Predicted Functional Partners:
LOC100697268
Sorting and assembly machinery component 50 homolog, like.
  
  
 0.894
I3KES2_ORENI
SAMM50 sorting and assembly machinery component.
  
  
 0.894
nus1
NUS1 dehydrodolichyl diphosphate synthase subunit.
  
  
 0.800
dhdds
Alkyl transferase; Belongs to the UPP synthase family.
  
  
 0.800
srebf2
Sterol regulatory element binding transcription factor 2.
    
 0.797
srebf1
Sterol regulatory element binding transcription factor 1.
    
 0.797
atf6
Activating transcription factor 6.
     
 0.792
LOC100705378
BZIP domain-containing protein.
     
 0.792
creb3l1
cAMP responsive element binding protein 3-like 1.
     
 0.766
I3KBQ7_ORENI
MYCN proto-oncogene, bHLH transcription factor.
    
 0.765
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.