Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Gadd45gip1Growth arrest and DNA-damage-inducible, gamma interacting protein 1. (275 aa)    
Predicted Functional Partners:
mrpl41
Mitochondrial ribosomal protein L41.
   
 
 0.985
ENSONIP00000026981
annotation not available
   
 
 0.985
mrpl11
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.985
mrpl40
Mitochondrial ribosomal protein L40.
   
 
 0.983
MRPL58
Mitochondrial ribosomal protein L58.
   
 
 0.978
mrpl52
Mitochondrial ribosomal protein L52.
   
 
 0.973
mrpl51
Mitochondrial ribosomal protein L51.
   
   0.973
mrpl28
Mitochondrial ribosomal protein L28.
   
   0.972
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.972
mrpl4
Mitochondrial ribosomal protein L4.
   
   0.972
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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