Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tbx20T-box transcription factor 20. (440 aa)    
Predicted Functional Partners:
slc25a21
Solute carrier family 25 member 21; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.965
ENSONIP00000024388
PHD finger protein 13.
    
   0.965
nkx2-5
NK2 homeobox 5.
   
 0.960
blvra
Biliverdin reductase A.
    
   0.922
gata4
GATA binding protein 4.
   
 0.905
gata6
GATA binding protein 6.
   
 0.837
gata5
GATA binding protein 5.
   
 0.821
hand2
Heart and neural crest derivatives expressed 2.
   
 
 0.808
I3KG33_ORENI
Myocyte enhancer factor 2cb.
    
 0.741
ISL2
ISL LIM homeobox 2b.
   
 0.738
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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