Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dpy19l1Dpy-19-like 1, like (H. sapiens). (738 aa)    
Predicted Functional Partners:
Ccdc62
Coiled-coil domain containing 62.
      
 0.739
nt5dc1
5'-nucleotidase domain containing 1.
      
 0.722
ccdc152
Uncharacterized protein.
      
 0.696
tsr3
Probable ribosome biogenesis protein; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.693
tsr2
TSR2 ribosome maturation factor.
      
 0.679
ccdc125
Coiled-coil domain containing 125.
      
 0.675
LOC100708025
Cytohesin 4b.
      
 0.673
tsr1
TSR1 ribosome maturation factor.
      
 0.647
pick1
Protein interacting with prkca 1.
      
 0.628
pigb
Mannosyltransferase.
      
 0.616
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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