Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lg20h1orf174Uncharacterized protein. (197 aa)    
Predicted Functional Partners:
jagn1
Protein jagunal homolog 1.
      
 0.811
mrps16
Mitochondrial ribosomal protein S16.
   
  
 0.774
sap18
Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.
      
 0.750
I3J4W3_ORENI
Serine/threonine kinase 35, like; Belongs to the protein kinase superfamily.
    
   0.685
LOC100707119
Serine/threonine kinase 35; Belongs to the protein kinase superfamily.
    
   0.685
pdik1l
PDLIM1 interacting kinase 1 like; Belongs to the protein kinase superfamily.
    
   0.685
rps5
Ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
      
 0.645
mrpl22
Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
    0.547
cnot8
CCR4-NOT transcription complex, subunit 8.
      
 0.533
LOC100701041
CCR4-NOT transcription complex, subunit 7.
      
 0.533
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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