Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100696776Uncharacterized protein. (406 aa)    
Predicted Functional Partners:
LOC100691077
Bradykinin receptor B1; Belongs to the G-protein coupled receptor 1 family.
    
 0.885
ace
Angiotensin-converting enzyme.
    
 0.806
c1qbp
Complement component 1, q subcomponent binding protein.
    
 0.748
LOC100711605
Malate synthase-like.
   
 
 0.737
ace2
Angiotensin-converting enzyme.
    
 0.712
cltrn
Si:dkey-194e6.1.
    
 0.712
HGFAC
HGF activator.
   
 0.680
ndufv2
NADH:ubiquinone oxidoreductase core subunit V2.
    
  0.649
LOC100694607
Cytochrome c-1.
    
 0.643
tbl3
Transducin (beta)-like 3.
      
 0.638
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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