Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100707395Suppressor of glucose, autophagy associated 1. (1806 aa)    
Predicted Functional Partners:
rnf41
Ring finger protein 41.
    
   0.763
itfg1
Integrin alpha FG-GAP repeat containing 1.
      
 0.651
I3J6H1_ORENI
Oxysterol-binding protein; Belongs to the OSBP family.
      
 0.624
tsnax
Translin-associated factor X.
    
   0.591
I3KLE2_ORENI
GID complex subunit 8 homolog b (S. cerevisiae).
      
 0.494
LOC100691864
GID complex subunit 8 homolog.
      
 0.494
I3KC60_ORENI
Nucleolar protein 4-like b.
      
 0.481
LOC100696587
Nucleolar protein 4-like a.
      
 0.417
Zfyve26
Zinc finger, FYVE domain containing 26.
      
 0.412
ncoa5
Nuclear receptor coactivator 5.
      
 0.410
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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