STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I3JHT7_ORENILRAT domain-containing protein. (158 aa)    
Predicted Functional Partners:
lcat
Lecithin-cholesterol acyltransferase.
   
 
 0.911
LOC100698638
Patatin-like phospholipase domain containing 7b.
    
 0.909
LOC100705489
Patatin-like phospholipase domain-containing protein 7 isoform X1.
    
 0.909
pnpla6
Patatin-like phospholipase domain containing 6.
    
 0.909
lypla2
Lysophospholipase 2.
     
 0.907
LOC100699552
Phospholipase.
   
 
 0.906
I3J8W5_ORENI
Phospholipase.
   
 
 0.906
LOC100710619
Phospholipase.
   
 
 0.906
LOC100692627
LRAT domain-containing protein.
  
  
 
0.905
LOC100693391
Lysophosphatidylcholine acyltransferase 4.
   
 0.903
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.