Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100710091BTB (POZ) domain containing 3a. (484 aa)    
Predicted Functional Partners:
CUL3
Cullin 3; Belongs to the cullin family.
   
 0.775
LOC109194151
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.775
cops2
COP9 signalosome subunit 2.
   
  0.756
cops5
COP9 signalosome subunit 5.
    
  0.752
cops3
COP9 signalosome subunit 3.
    
  0.752
cops8
COP9 signalosome subunit 8.
    
  0.702
cops4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).
    
  0.699
ENSONIP00000050375
annotation not available
      
 0.680
COPS6
COP9 signalosome subunit 6.
    
  0.665
tasp1
Taspase, threonine aspartase, 1.
   
  
 0.651
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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