Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rdh5Retinol dehydrogenase 5 (11-cis/9-cis); Belongs to the short-chain dehydrogenases/reductases (SDR) family. (332 aa)    
Predicted Functional Partners:
LOC100702412
Retinoid isomerohydrolase RPE65 a.
     
 0.948
LOC100694376
Retinoid isomerohydrolase RPE65 b.
     
 0.948
I3JVB1_ORENI
Lecithin retinol acyltransferase a.
   
 
 0.939
LOC100704704
LRAT domain-containing protein.
     
 0.930
rdh10
Retinol dehydrogenase 10a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.929
ENSONIP00000045809
annotation not available
   
 
  0.919
LOC100712580
Lecithin retinol acyltransferase b, tandem duplicate 2.
     
  0.916
LOC100693144
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
0.901
LOC100703897
Retinol dehydrogenase 20; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.887
LOC100690619
Dehydrogenase/reductase (SDR family) member 4.
  
 
 0.885
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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