Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
osr2Odd-skipped related transciption factor 2. (273 aa)    
Predicted Functional Partners:
I3KNM4_ORENI
PH domain-containing protein.
      
 0.608
vhl
Von Hippel-Lindau tumor suppressor.
    
  0.582
fam20b
FAM20B glycosaminoglycan xylosylkinase.
     
 0.579
barx1
BARX homeobox 1.
    
 0.561
pitx2
Homeobox protein.
    
 
 0.558
pax9
Paired box 9.
    
 
 0.554
msx1
Muscle segment homeobox 1a.
    
 
 0.542
LOC100691488
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.491
LOC100693544
LIM homeobox 1b.
   
 0.480
lhx1
LIM homeobox 1a.
   
 0.480
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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