Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100704722Polyserase-2-like. (538 aa)    
Predicted Functional Partners:
oser1
Oxidative stress responsive serine-rich 1.
      
 0.730
LOC100702095
Tetraspanin.
     
 0.568
ENSONIP00000045181
annotation not available
  
     0.502
I3K8H2_ORENI
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
  
     0.494
I3JR68_ORENI
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.412
ENSONIP00000043796
annotation not available
  
     0.411
HGFAC
HGF activator.
  
0.408
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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