Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
serinc4Serine incorporator 4. (514 aa)    
Predicted Functional Partners:
serinc1
Serine incorporator 1.
    
 0.646
LOC100702990
Si:ch73-267c23.10.
    
 0.646
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
 0.613
LOC100709183
Uncharacterized protein.
      
 0.577
mfsd10
Major facilitator superfamily domain containing 10.
      
 0.535
slc30a5
Solute carrier family 30 member 5.
      
 0.527
NEMF
Nuclear export mediator factor.
      
 0.505
melk
Non-specific serine/threonine protein kinase.
      
 0.494
LOC100710164
Serine incorporator 2, like.
    
 0.483
LOC100709596
Serine incorporator 2.
    
 0.483
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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