Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
abhd12Abhydrolase domain containing 12. (391 aa)    
Predicted Functional Partners:
gins1
GINS complex subunit 1 (Psf1 homolog).
      
 0.743
LOC100708570
Barrier-to-autointegration factor-like protein.
   
  
 0.705
banf1
Barrier to autointegration factor 1.
   
  
 0.705
abhd4
Abhydrolase domain containing 4.
  
 
 0.671
abhd16a
AB hydrolase-1 domain-containing protein.
      
 0.665
napepld
N-acyl phosphatidylethanolamine phospholipase D.
     
 0.640
hells
Helicase, lymphoid specific.
      
 0.552
abhd6
Abhydrolase domain containing 6.
  
 
 0.530
LOC100698381
Abhydrolase domain containing 6b.
  
 
 0.530
rasl11b
RAS-like, family 11, member B.
     
 0.521
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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