Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
samd4aSterile alpha motif domain containing 4A. (716 aa)    
Predicted Functional Partners:
LOC100690744
Nanos-type domain-containing protein; Belongs to the nanos family.
    
 
 0.815
LOC100689869
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2; Belongs to the 14-3-3 family.
    
   0.664
LOC100704829
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
   0.664
ss18
SS18 subunit of BAF chromatin remodeling complex.
      
 0.626
ireb2
Iron-responsive element binding protein 2; Belongs to the aconitase/IPM isomerase family.
    
 
 0.614
cnot6
CCR4-NOT transcription complex, subunit 6a.
    
 
 0.591
LRRC27
Uncharacterized protein.
    
 
 0.591
Cnot6l
CCR4-NOT transcription complex, subunit 6-like.
    
 
 0.591
carhsp1
Calcium regulated heat stable protein 1.
    
 
 0.589
rnpc3
RNA-binding region (RNP1, RRM) containing 3.
      
 0.573
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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