STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc22a18Solute carrier family 22 member 18. (458 aa)    
Predicted Functional Partners:
phlda2
Pleckstrin homology-like domain, family A, member 2.
      
 0.645
LOC100702699
Nucleosome assembly protein 1-like 4a; Belongs to the nucleosome assembly protein (NAP) family.
      
 0.582
Slc22a31
Solute carrier family 22 member 31.
   
  
 0.573
tssc4
Uncharacterized protein.
      
 0.559
slc22a16
Solute carrier family 22 member 16.
   
  
 0.556
LOC100689819
Oxysterol-binding protein; Belongs to the OSBP family.
   
  
 0.554
DLK1
Delta like non-canonical Notch ligand 1.
      
 0.479
LOC100699832
Necdin-like 2.
      
 0.478
OSBPL8
Oxysterol-binding protein; Belongs to the OSBP family.
   
  
 0.471
LOC100697082
Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family.
      
 0.442
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.