STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrrc73Leucine rich repeat containing 73. (331 aa)    
Predicted Functional Partners:
ankrd13d
Ankyrin repeat domain 13 family, member D.
      
 0.658
tepsin
TEPSIN adaptor related protein complex 4 accessory protein.
      
 0.647
nprl2
NPR2 like, GATOR1 complex subunit.
      
 0.590
lg7h9orf16
Expressed sequence BC139872.
      
 0.495
vsig10
Uncharacterized protein.
      
 0.448
polr3h
Polymerase (RNA) III (DNA directed) polypeptide H.
      
 0.434
DOCK3
Dedicator of cytokinesis 3; Belongs to the DOCK family.
      
 0.431
I3J9T5_ORENI
Uncharacterized protein; Belongs to the DOCK family.
      
 0.431
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.