Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100707272Iroquois homeobox 1a. (495 aa)    
Predicted Functional Partners:
irx6
Iroquois homeobox 6a.
   
 
 0.718
LOC100707005
Iroquois homeobox 4a.
   
 
 0.718
fermt1
Fermitin family member 1.
   
  
 0.708
Zfyve9
Zinc finger, FYVE domain containing 9a.
      
 0.702
LOC100691448
Teashirt zinc finger homeobox 1.
    
 0.702
dlx1
Distal-less homeobox 1a.
   
 
 0.682
dlx2
Distal-less homeobox 2b.
   
 
 0.669
LOC100696648
Mohawk homeobox b.
    
 
 0.606
mkx
Mohawk homeobox a.
    
 
 0.606
I3JF61_ORENI
Bone morphogenetic protein 16.
      
 0.568
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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