Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NELL1Neural EGFL like 1. (816 aa)    
Predicted Functional Partners:
lg3h4orf48
Si:dkeyp-75h12.5.
   
 
 0.779
robo3
Roundabout, axon guidance receptor, homolog 3 (Drosophila).
    
 0.726
Ndufaf6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
      
 0.655
dbr1
Debranching RNA lariats 1.
    
 
 0.607
Uhmk1
U2AF homology motif (UHM) kinase 1.
    
 0.539
LOC100703124
Uncharacterized protein.
    
 0.515
s100z
Protein S100; Belongs to the S-100 family.
   
 0.503
ano6
Anoctamin.
      
 0.490
hes4
Hairy-related 9.
    
 0.480
gsap
Gamma-secretase activating protein.
    
 0.454
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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