STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrp4Low density lipoprotein receptor-related protein 4. (1902 aa)    
Predicted Functional Partners:
MUSK
Muscle associated receptor tyrosine kinase.
   
 0.933
ldlrap1
Low density lipoprotein receptor adaptor protein 1b.
    
 0.911
Lrpap1
Low density lipoprotein receptor-related protein associated protein 1.
    
 0.882
agrn
Agrin.
    
 0.872
dab2
DAB adaptor protein 2.
    
 0.746
LOC100699941
Putative apolipoprotein E.
    
 0.742
LOC100698110
Dickkopf WNT signaling pathway inhibitor 1a.
    
 0.733
dbx1
Developing brain homeobox 1a.
      
 0.728
slc6a5
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.721
wnt1
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
    
 0.717
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.