STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1007118712-aminoethanethiol (cysteamine) dioxygenase a. (260 aa)    
Predicted Functional Partners:
GADL1
Glutamate decarboxylase like 1.
     
 0.908
LOC100712040
Uncharacterized protein.
     
 0.908
gad2
Glutamate decarboxylase 2.
     
 0.908
gad1
Glutamate decarboxylase 1a.
     
 0.908
Csad
Cysteine sulfinic acid decarboxylase.
     
 0.908
I3KYW3_ORENI
2-aminoethanethiol (cysteamine) dioxygenase b.
  
  
 
0.903
cdo1
Cysteine dioxygenase.
      
 0.549
metap1
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
      
 0.422
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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