Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hhexHomeobox domain-containing protein. (289 aa)    
Predicted Functional Partners:
cdkal1
CDK5 regulatory subunit associated protein 1-like 1.
      
 0.755
LOC100706011
POU domain protein.
   
  
 0.686
LOC100704522
Zinc finger protein 366.
   
 0.685
LOC100702133
Forkhead box A3.
   
 
 0.685
LOC100698515
GLIS family zinc finger 3.
    
 0.649
ENSONIP00000042164
GLIS family zinc finger 1b.
    
 0.649
I3KPR2_ORENI
GLIS family zinc finger 1a.
    
 0.649
eif4e
Eukaryotic translation initiation factor 4eb; Belongs to the eukaryotic initiation factor 4E family.
    
   0.645
LOC100695556
Eukaryotic translation initiation factor 4ea; Belongs to the eukaryotic initiation factor 4E family.
    
   0.645
prrx1
Paired related homeobox 1a.
      
 0.639
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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