Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSONIP00000009261Glycogenin-1 isoform X1. (428 aa)    
Predicted Functional Partners:
gbe1
Glucan (1,4-alpha-), branching enzyme 1b.
   
 0.991
gys2
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.982
gys1
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.979
agl
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b.
   
 0.950
LOC100711459
Glycogenin 1a.
     
  0.916
LOC100709923
Uncharacterized protein.
     
  0.916
I3JFA0_ORENI
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
     
  0.916
LOC100710204
UTP--glucose-1-phosphate uridylyltransferase.
   
 
 0.914
ugp2
UTP--glucose-1-phosphate uridylyltransferase.
   
 
 0.914
stbd1
Starch-binding domain-containing protein 1.
   
 
 0.821
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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