Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100698692Uncharacterized protein. (1779 aa)    
Predicted Functional Partners:
mttp
Microsomal triglyceride transfer protein.
   
 0.828
LOC100711490
Uncharacterized protein.
   
 0.754
apoa4b
Putative apolipoprotein A4b.
   
 0.754
LOC100708634
Apolipoprotein A-Ib.
   
 0.754
Sorl1
Sortilin-related receptor, L(DLR class) A repeats containing.
    
 0.643
ENSONIP00000000682
Intersectin 2a.
     
 0.579
I3KKD0_ORENI
Intersectin 2b.
     
 0.579
LOC100707019
Uncharacterized protein.
   
 0.578
LOC100699941
Putative apolipoprotein E.
   
 0.578
esr1
Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues; Belongs to the nuclear hormone receptor family. NR3 subfamily.
   
  
 0.530
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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