Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100695703Si:ch211-212o1.2. (283 aa)    
Predicted Functional Partners:
LOC102081483
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.936
LOC100694737
Transmembrane protein 189.
   
 0.930
Selenoi
Selenoprotein I; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.923
cept1
Choline/ethanolamine phosphotransferase 1b; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.917
LOC100693391
Lysophosphatidylcholine acyltransferase 4.
     
  0.916
LOC100702365
Uncharacterized protein.
     
  0.916
LOC100705452
Zgc:194275.
     
  0.916
I3J8W5_ORENI
Phospholipase.
     
  0.916
LOC100712009
LRAT domain-containing protein.
   
 
  0.916
LOC100690648
PLA2c domain-containing protein.
     
  0.916
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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