STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
n4bp1Nedd4 binding protein 1. (979 aa)    
Predicted Functional Partners:
ikbkg
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
  0.633
LOC100702139
Uncharacterized protein; Belongs to the peptidase C14A family.
     
 0.616
LOC109194206
Caspase 10, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
     
 0.593
I3KF49_ORENI
Caspase 20, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
     
 0.559
LOC100690293
Ubiquitin-NEDD8-like protein RUB2.
    
   0.529
LOC100711516
Ubiquitin-like protein Nedd8.
    
   0.529
sec62
SEC62 homolog, preprotein translocation factor.
      
 0.446
optn
Optineurin.
    
  0.441
LOC100711295
Si:ch73-252i11.1.
    
 
 0.436
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.