rtcb protein (Oreochromis niloticus) - STRING interaction network

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[Homology]

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rtcb

RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs. (505 aa)

Predicted Functional Partners:

ddx1

0.997

Fam98b

0.997

zbtb8os

0.995

Lg16h2orf49

0.995

I3JB52_ORENI

0.992

rtraf

0.976

ENSONIP00000036220

0.976

rtca

0.911

pyroxd1

0.864

LOC100700754

0.858

Your Current Organism:

Oreochromis niloticus

NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSONIP00000036220	Fam98b	ENSONIP00000036220	ENSONIP00000001783	RNA transcription, translation and transport factor protein-like.	Family with sequence similarity 98 member B.	0.972
ENSONIP00000036220	I3JB52_ORENI	ENSONIP00000036220	ENSONIP00000033654	RNA transcription, translation and transport factor protein-like.	Family with sequence similarity 98 member A.	0.934
ENSONIP00000036220	LOC100700754	ENSONIP00000036220	ENSONIP00000007897	RNA transcription, translation and transport factor protein-like.	Uncharacterized protein.	0.636
ENSONIP00000036220	Lg16h2orf49	ENSONIP00000036220	ENSONIP00000017877	RNA transcription, translation and transport factor protein-like.	Si:dkeyp-118h3.6.	0.972
ENSONIP00000036220	ddx1	ENSONIP00000036220	ENSONIP00000000655	RNA transcription, translation and transport factor protein-like.	DEAD (Asp-Glu-Ala-Asp) box helicase 1.	0.971
ENSONIP00000036220	rtcb	ENSONIP00000036220	ENSONIP00000009422	RNA transcription, translation and transport factor protein-like.	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	0.976
ENSONIP00000036220	zbtb8os	ENSONIP00000036220	ENSONIP00000015398	RNA transcription, translation and transport factor protein-like.	Zinc finger and BTB domain containing 8 opposite strand.	0.633
Fam98b	ENSONIP00000036220	ENSONIP00000001783	ENSONIP00000036220	Family with sequence similarity 98 member B.	RNA transcription, translation and transport factor protein-like.	0.972
Fam98b	I3JB52_ORENI	ENSONIP00000001783	ENSONIP00000033654	Family with sequence similarity 98 member B.	Family with sequence similarity 98 member A.	0.984
Fam98b	LOC100700754	ENSONIP00000001783	ENSONIP00000007897	Family with sequence similarity 98 member B.	Uncharacterized protein.	0.589
Fam98b	Lg16h2orf49	ENSONIP00000001783	ENSONIP00000017877	Family with sequence similarity 98 member B.	Si:dkeyp-118h3.6.	0.996
Fam98b	ddx1	ENSONIP00000001783	ENSONIP00000000655	Family with sequence similarity 98 member B.	DEAD (Asp-Glu-Ala-Asp) box helicase 1.	0.995
Fam98b	rtcb	ENSONIP00000001783	ENSONIP00000009422	Family with sequence similarity 98 member B.	RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs.	0.997
Fam98b	rtraf	ENSONIP00000001783	ENSONIP00000015030	Family with sequence similarity 98 member B.	RNA transcription, translation and transport factor.	0.972
Fam98b	zbtb8os	ENSONIP00000001783	ENSONIP00000015398	Family with sequence similarity 98 member B.	Zinc finger and BTB domain containing 8 opposite strand.	0.891
I3JB52_ORENI	ENSONIP00000036220	ENSONIP00000033654	ENSONIP00000036220	Family with sequence similarity 98 member A.	RNA transcription, translation and transport factor protein-like.	0.934
I3JB52_ORENI	Fam98b	ENSONIP00000033654	ENSONIP00000001783	Family with sequence similarity 98 member A.	Family with sequence similarity 98 member B.	0.984
I3JB52_ORENI	LOC100700754	ENSONIP00000033654	ENSONIP00000007897	Family with sequence similarity 98 member A.	Uncharacterized protein.	0.587
I3JB52_ORENI	Lg16h2orf49	ENSONIP00000033654	ENSONIP00000017877	Family with sequence similarity 98 member A.	Si:dkeyp-118h3.6.	0.861
I3JB52_ORENI	ddx1	ENSONIP00000033654	ENSONIP00000000655	Family with sequence similarity 98 member A.	DEAD (Asp-Glu-Ala-Asp) box helicase 1.	0.992

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