STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mfsd8Major facilitator superfamily domain containing 8. (492 aa)    
Predicted Functional Partners:
LOC102080728
MFS domain-containing protein.
     
 
0.900
LOC100689844
Battenin.
    
 
 0.769
cln5
CLN5 intracellular trafficking protein.
      
 0.740
ppt1
Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile).
      
 0.740
cln8
CLN8 transmembrane ER and ERGIC protein.
      
 0.659
tpp1
Tripeptidyl peptidase I.
      
 0.658
mpl
MPL proto-oncogene, thrombopoietin receptor.
    
 0.649
mfsd12
Major facilitator superfamily domain containing 12a.
      
 0.588
abhd18
Abhydrolase domain containing 18.
      
 0.582
LOC100706678
Inhibitor of DNA binding 3.
      
 0.582
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.