Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100710660T-box transcription factor Ta. (463 aa)    
Predicted Functional Partners:
mixl1
Mix paired-like homeobox.
   
 0.884
I3K2Y5_ORENI
Notochord homeobox.
    
 0.869
LOC100706011
POU domain protein.
   
 0.795
sox17
SRY-box transcription factor 17.
    
 0.790
LOC100709336
Forkhead box A2.
    
 0.789
LOC100705944
Fork-head domain-containing protein.
    
 0.789
bmp4
Bone morphogenetic protein 4.
     
 0.786
gata4
GATA binding protein 4.
    
 0.766
gata6
GATA binding protein 6.
    
 0.733
LOC100709151
Forkhead box H1.
   
 
 0.722
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
Server load: low (18%) [HD]