Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
amacrAlpha-methylacyl-CoA racemase. (382 aa)    
Predicted Functional Partners:
acox1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.977
LOC100711605
Malate synthase-like.
    
 0.924
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 
 0.866
ehhadh
Enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.835
LOC100711328
Sterol carrier protein 2a; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.792
acbd7
Carnitine O-octanoyltransferase.
     
 0.784
hsd17b4
Hydroxysteroid (17-beta) dehydrogenase 4.
  
 
 0.770
Pex14
Peroxisomal biogenesis factor 14.
     
 0.753
acox3
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 
 0.743
LOC100698399
Non-specific lipid-transfer protein.
  
 
 0.737
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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