Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
trappc8Trafficking protein particle complex 8. (1473 aa)    
Predicted Functional Partners:
Trappc12
Trafficking protein particle complex 12.
   
 0.999
trappc2l
Trafficking protein particle complex 2-like.
    
 0.999
trappc1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.998
TRAPPC2
Trafficking protein particle complex 2.
    
 0.997
trappc3
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.997
trappc11
Trafficking protein particle complex 11.
   
 0.996
trappc4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.995
trappc10
Trafficking protein particle complex 10.
   
 0.994
trappc13
Trafficking protein particle complex 13.
   
 0.993
trappc9
Trafficking protein particle complex 9.
   
 0.993
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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